BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C11SP1|AL426013
(808 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1581 0.0
>3x_Contig1800
Length = 38778
Score = 1581 bits (796), Expect = 0.0
Identities = 805/808 (99%), Gaps = 1/808 (0%)
Strand = Plus / Plus
Query: 1 ccttccttttcgggnaaagtggtttaaattgcatcaacttaatcagttctatgatgatta 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27252 ccttccttttcggg-aaagtggtttaaattgcatcaacttaatcagttctatgatgatta 27310
Query: 61 cagattaagcttccgatatctaaagacagattttcgttactagcagttatagtagcgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27311 cagattaagcttccgatatctaaagacagattttcgttactagcagttatagtagcgcag 27370
Query: 121 aagcgcagaaaggcagaagtttgattttttgatttaatccagttgtccagttgtccagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27371 aagcgcagaaaggcagaagtttgattttttgatttaatccagttgtccagttgtccagtt 27430
Query: 181 ggttgcaaaatgagaggacactgcttaacaaaccgaatgcagtatgtggaaatggactta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27431 ggttgcaaaatgagaggacactgcttaacaaaccgaatgcagtatgtggaaatggactta 27490
Query: 241 gctttatccattgggggaggaaagcgctgcccgctttgatgagaattaagggtaggtagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27491 gctttatccattgggggaggaaagcgctgcccgctttgatgagaattaagggtaggtagt 27550
Query: 301 ttggccgttgagatatgctagattacgcaggcgttgtttggggatttttgattatkagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 27551 ttggccgttgagatatgctagattacgcaggcgttgtttggggatttttgattatgagtt 27610
Query: 361 gccgtaactgttcccaatattgatttcttttctctttgtgcatggcaagatcaggttatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27611 gccgtaactgttcccaatattgatttcttttctctttgtgcatggcaagatcaggttatc 27670
Query: 421 ggccaggacagctgctggcgtggatagaatggggaaattacagttgcagctctaaaggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27671 ggccaggacagctgctggcgtggatagaatggggaaattacagttgcagctctaaaggaa 27730
Query: 481 taccagttagagttggtcagattttgttctgctttaagttatgacgaagattaggataat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27731 taccagttagagttggtcagattttgttctgctttaagttatgacgaagattaggataat 27790
Query: 541 ggatatctaakattaatcccttgaatgttgattaggatctaaagatctgtttgacgtcag 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27791 ggatatctaagattaatcccttgaatgttgattaggatctaaagatctgtttgacgtcag 27850
Query: 601 ggaaatgcacttatgttcttcctttatctatatccacttatcaatttcaaaacgcataca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27851 ggaaatgcacttatgttcttcctttatctatatccacttatcaatttcaaaacgcataca 27910
Query: 661 gggttttgaacaccaattgagtcttctatcataggaaatcaaaacgtatataagaagctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27911 gggttttgaacaccaattgagtcttctatcataggaaatcaaaacgtatataagaagctg 27970
Query: 721 tgatgaacactacagagttatgttattagcaactgatgatctagttgttaaatatcttac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27971 tgatgaacactacagagttatgttattagcaactgatgatctagttgttaaatatcttac 28030
Query: 781 aatctagattagtgcttccgttgcggca 808
||||||||||||||||||||||||||||
Sbjct: 28031 aatctagattagtgcttccgttgcggca 28058
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5547
Number of Sequences: 1807
Number of extensions: 5547
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 808
length of database: 10,358,551
effective HSP length: 16
effective length of query: 792
effective length of database: 10,329,639
effective search space: 8181074088
effective search space used: 8181074088
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)